The detailed information of tRNA gene sequence


Sequence ID>A178000237
Genome IDCP002656
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera cuprina Ar-4 [CP002656]
Start position on genome 53244
End posion on genome 53342
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttattatgaT
tRNA gene sequence 
GCCGGGGTGCCCGAGCGGACCAAGGGGCTGGCCTTGAGAGCCAGTAGGGTCATTCCCTGC
GCGGGTTCAAATCCCGCCCCCGGCGTaa
Downstream region at tRNA end position 
acattctaac
Secondary structure (Cloverleaf model)
>A178000237	Ser	TGA
                   T      GTaa acattctaac
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    G       G C C C       G C G G G     C
    G         | | |                 T T
    A       A G G G
      C C A        G     TAGGGTCATTCCCTGC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    T G A
intron: position=38, length=12 (in A-loop)
AGCATCCTGGTT
Intron
Comment/Decision
Genome/Seq. Info.-

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