The detailed information of tRNA gene sequence


Sequence ID>A178000244
Genome IDCP002656
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera cuprina Ar-4 [CP002656]
Start position on genome 585844
End posion on genome 585759
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
atttaagtgt
tRNA gene sequence 
GCCGCGGTAGCTCAGCCTGGCTGGAGCGCTGCCCTGGTAAGGCAGAGGCCCCGGGTTCAA
ATCCCGGCCGCGGCTtct
Downstream region at tRNA end position 
cacatgtaag
Secondary structure (Cloverleaf model)
>A178000244	Thr	GGT
                   t      Ttct cacatgtaag
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    C T G          G     AGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A *
                    G G T
intron: position=38, length=11 (in A-loop)
ATTCACCGGGC
Intron
Comment/Decision
Genome/Seq. Info.-

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