The detailed information of tRNA gene sequence


Sequence ID>A178000259
Genome IDCP002817
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus acidocaldarius N8 [CP002817]
Start position on genome 716554
End posion on genome 716450
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
tttgtgtctT
tRNA gene sequence 
GCGGGGGTGCCCGAGCAAGGTCAAAGGGGTCGGGCTTAGGCCCCGATGGTGTAGGCCTGC
GTGGGTTCAAATCCCACCCCCCGCATtc
Downstream region at tRNA end position 
ttgatcatag
Secondary structure (Cloverleaf model)
>A178000259	Leu	TAG
                   T      ATtc ttgatcatag
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    A C G A        G      | | | | |     A
  A         G C C C       G T G G G     C
  G           | | |                 T T
  G         A G G G
    T C A A        G     TGGTGTAGGCCTGC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       C
                  T       G *
                    T A G
intron: position=38, length=18 (in A-loop)
ACCCCAAACGGGTAAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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