The detailed information of tRNA gene sequence


Sequence ID>A178000272
Genome IDCP002818
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus acidocaldarius Ron12/I [CP002818]
Start position on genome 2158184
End posion on genome 2158094
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
taattatctc
tRNA gene sequence 
GCGGCCGTCGTCTAGTCTGGATTAGGACGCTGGCCTTCCAAGCCAGCAATCCCGGGTTCG
AATCCCGGCGGCCGCAtta
Downstream region at tRNA end position 
aaaatattgt
Secondary structure (Cloverleaf model)
>A178000272	Gly	TCC
                   c      Atta aaaatattgt
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C T G A        C      | | | | |     G
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    A T T A        G     CAATC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T C C
intron: position=38, length=15 (in A-loop)
TCAGTCAGGGAGGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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