The detailed information of tRNA gene sequence


Sequence ID>A178000273
Genome IDCP002818
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus acidocaldarius Ron12/I [CP002818]
Start position on genome 2179327
End posion on genome 2179241
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
atatagacat
tRNA gene sequence 
GCCGCGGTAGCTCAGTTGGCAGAGCGCCGGGCTGTTAACCCGGTGGTCGGTGGTCCGAGT
CCACCCCGCGGCGCgt
Downstream region at tRNA end position 
ctacaaaact
Secondary structure (Cloverleaf model)
>A178000273	Asn	GTT
                   t      GCgt ctacaaaact
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T C
    G       G A G C
      C A          G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A *
                    G T T
intron: position=38, length=13 (in A-loop)
AATCCTTACGGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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