The detailed information of tRNA gene sequence


Sequence ID>A178000295
Genome IDCP003098
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum ferrireducens 1860 [CP003098]
Start position on genome 1158877
End posion on genome 1158968
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
atatgtaaag
tRNA gene sequence 
GGGCCCGTAGCTCAGTCAGGACAGAGCGGCGGCCTCCGGAGCCGTAGGACGTGGGTTCAA
ATCCCACCGGGCCCGCCA
Downstream region at tRNA end position 
gtgaggcgat
Secondary structure (Cloverleaf model)
>A178000295	Arg	CCG
                   g      GCCA gtgaggcgat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
    C T G A        A      | | | | |     A
  A         C T C G       G T G G G     C
  G         | | | |                 T T
  G         G A G C
    A C A          G     AGGAC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    C C G
intron: position=38, length=14 (in A-loop)
AGCGCGGCGGAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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