The detailed information of tRNA gene sequence


Sequence ID>A178000309
Genome IDCP003168
Search identical group
Phylum/ClassUnclassified
SpeciesAciduliprofundum sp. MAR08-339 [CP003168]
Start position on genome 583735
End posion on genome 583856
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
agcagagcgt
tRNA gene sequence 
AGCCCCGTGGTGTAGCGGTCAAGCATGCGGGACTTTGGATCCCGCGACGGGGGTTCGAAT
CCTCCCGGGGCTGCta
Downstream region at tRNA end position 
cttattccat
Secondary structure (Cloverleaf model)
>A178000309	Gln	TTG
                   t      GCta cttattccat
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C T C C     A
      C G A        G      | | + | |     G
    G       T G T G       G G G G G     C
    G       + | | +                 T T
    T       G C A T
      C A A        G     CGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    T T G
intron: position=38, length=48 (in A-loop)
TGGAGCCCCTTTGGAAAAGGTGCTCTACCCCCAAAGGGCTTCGAGGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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