The detailed information of tRNA gene sequence


Sequence ID>A178000319
Genome IDCP003321
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus amylolyticus DSM 16532 [CP003321]
Start position on genome 33503
End posion on genome 33401
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
atgaatcagt
tRNA gene sequence 
GCGGGGGTGCCCGAGCTTGGCCAAAGGGGGCGGACTCAAGATCCGCTGGCGTAGGCCTGC
GTGGGTTCAAATCCCACCCCCCGCACCt
Downstream region at tRNA end position 
tccattactc
Secondary structure (Cloverleaf model)
>A178000319	Leu	CAA
                   t      ACCt tccattactc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     A
  T         G C C C       G T G G G     C
  G           | | |                 T T
  G         A G G G
    C C A A        G     TGGCGTAGGCCTGC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    C A A
intron: position=38, length=16 (in A-loop)
ACGAGCCCAGGGGGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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