The detailed information of tRNA gene sequence


Sequence ID>A178000322
Genome IDCP003321
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus amylolyticus DSM 16532 [CP003321]
Start position on genome 802260
End posion on genome 802155
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tacggtgaac
tRNA gene sequence 
GGGGCCGTCGTCTAGCCTGGCTAGGATGCCGGCCTGGGGCGCCGGTGGTCCCGGGTTCAA
ATCCCGGCGGCCCCAtta
Downstream region at tRNA end position 
attaaaaatt
Secondary structure (Cloverleaf model)
>A178000322	Pro	GGG
                   c      Atta attaaaaatt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    C T A          G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       G *
                    G G G
intron: position=38, length=31 (in A-loop)
GGAGTACCCCCGTGGCCCAGGACTCCCGGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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