The detailed information of tRNA gene sequence


Sequence ID>A178000344
Genome IDCP003531
Search identical group
Phylum/ClassThermoproteota
SpeciesThermogladius calderae 1633 [CP003531]
Start position on genome 91106
End posion on genome 91206
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
agcgaaaatg
tRNA gene sequence 
GCCCGGGTAGCTCAGCCTGGTAGAGCGCCGGGCTGTGGACCCGGAGGTCCCGGGTTCAAA
TCCCGGCCCGGGCCCtt
Downstream region at tRNA end position 
catttgactt
Secondary structure (Cloverleaf model)
>A178000344	His	GTG
                   g      CCtt catttgactt
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G *
                    G T G
intron: position=38, length=26 (in A-loop)
ACGGCCCCTAATAGGGGCCGGCACAG
Intron
Comment/Decision
Genome/Seq. Info.-

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