The detailed information of tRNA gene sequence


Sequence ID>A178000346
Genome IDCP003531
Search identical group
Phylum/ClassThermoproteota
SpeciesThermogladius calderae 1633 [CP003531]
Start position on genome 382301
End posion on genome 382203
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aagaactcga
tRNA gene sequence 
GCCGGGGTAGCTCAGCCTGGTAGAGCGCCGGGCTGTTAACCCGGTGGTCCGGGGTTCGAG
TCCCCGCCCCGGCGCtt
Downstream region at tRNA end position 
tatccaactt
Secondary structure (Cloverleaf model)
>A178000346	Asn	GTT
                   a      GCtt tatccaactt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     G C C C C     A
      C G A        A      | | | | |     G
    C       C T C G       C G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A *
                    G T T
intron: position=38, length=24 (in A-loop)
ACCGCGTTAGGTAGCCTGGTGGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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