The detailed information of tRNA gene sequence


Sequence ID>A178000349
Genome IDCP003842
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus koreensis AR1 [CP003842]
Start position on genome 286948
End posion on genome 286857
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
tctttcaagt
tRNA gene sequence 
AGCCCGATAGTCTAGCGGTCAAGGATTCTGCCCTCTGGAGGCGGAGACGGCAGTTCGAAT
CTGCCTCGGGCTACtg
Downstream region at tRNA end position 
gaatattcta
Secondary structure (Cloverleaf model)
>A178000349	Gln	CTG
                   t      ACtg gaatattcta
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     C C G T C     A
      C G A        A      | | | | |     G
    G       T C T G       G G C A G     C
    G       + | | +                 T T
    T       G G A T
      C A A        T     AGAC
                    C - G
                    T + G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G *
                    C T G
intron: position=38, length=18 (in A-loop)
ATCTCACAAAGTGGATAT
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK