The detailed information of tRNA gene sequence


Sequence ID>A178000350
Genome IDCP003843
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus sediminis AR2 [CP003843]
Start position on genome 297523
End posion on genome 297435
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
ttatttcagt
tRNA gene sequence 
AGCCCGATAGTCTAGTGGTCAAGGATTCTGCCCTCTGGAGGCGGAGACGGCAGTTCGAAT
CTGCCTCGGGCTACtg
Downstream region at tRNA end position 
gaaaaatttc
Secondary structure (Cloverleaf model)
>A178000350	Gln	CTG
                   t      ACtg gaaaaatttc
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     C C G T C     A
      T G A        A      | | | | |     G
    G       T C T G       G G C A G     C
    G       + | | +                 T T
    T       G G A T
      C A A        T     AGAC
                    C - G
                    T + G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G *
                    C T G
intron: position=38, length=15 (in A-loop)
ATCTCAGGAATGGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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