The detailed information of tRNA gene sequence


Sequence ID>A178000369
Genome IDCP004145
Search identical group
Phylum/ClassUnclassified
SpeciesFerroplasma acidarmanus Fer1 [CP004145]
Start position on genome 620889
End posion on genome 620790
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ttatctgcta
tRNA gene sequence 
CCCGGCTTAGCTCAGTTGGTAGAGCGATGGACTGTAGATCCATAGGTCTCTGGTTCGAAT
CCGGAAGCCGGGAttt
Downstream region at tRNA end position 
attcaggttt
Secondary structure (Cloverleaf model)
>A178000369	Tyr	GTA
                   a      Attt attcaggttt
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A          T A
                    T     A G G C C     A
      T G A        A      | | + | |     G
    T       C T C G       T C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    G T A
intron: position=38, length=27 (in A-loop)
AGTGATATACTGCCAGAAAACGCAGTC
Intron
Comment/Decision
Genome/Seq. Info.-

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