The detailed information of tRNA gene sequence


Sequence ID>A178000371
Genome IDCP005290
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus sulfaticallidus PM70-1 [CP005290]
Start position on genome 569152
End posion on genome 569064
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
taatacagaa
tRNA gene sequence 
GGGGCCGTAGGGTAGCCTGGTTATCCTCCCAGCTTGGGGTGCTGGAGACCCGAGTTCAAA
TCTCGGCGGCCCCACtg
Downstream region at tRNA end position 
attcaaagat
Secondary structure (Cloverleaf model)
>A178000371	Pro	GGG
                   a      ACtg attcaaagat
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C T C     A
    C C G A        A      | | | | |     A
  T         T G G G       C C G A G     C
  G           | | +                 T T
  G         T C C T
    T T A          C     AGAC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G *
                    G G G
intron: position=38, length=14 (in A-loop)
AGCTTTGCCCGAAG
Intron
Comment/Decision
Genome/Seq. Info.-

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