The detailed information of tRNA gene sequence


Sequence ID>A178000372
Genome IDCP005290
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus sulfaticallidus PM70-1 [CP005290]
Start position on genome 679927
End posion on genome 679819
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatagtctga
tRNA gene sequence 
GCCGGGGTTGCCGAGTGGTAAGGCGGTGGTCTGCTAAACCACTGGGCTCTGCCCGCGTGG
GTTCGAATCCCACCCCCGGCGttt
Downstream region at tRNA end position 
ttgaatttga
Secondary structure (Cloverleaf model)
>A178000372	Ser	GCT
                   a      Gttt ttgaatttga
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
        G A        T      | | | | |     G
      T     G C C G       G T G G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TGGGCTCTGCCCGC
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A *
                    G C T
intron: position=38, length=28 (in A-loop)
ACAGTGGGCAGAGTAATTAAAGGTGGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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