The detailed information of tRNA gene sequence


Sequence ID>A178000373
Genome IDCP005290
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus sulfaticallidus PM70-1 [CP005290]
Start position on genome 843588
End posion on genome 843492
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ctgaatttcc
tRNA gene sequence 
CCCGCCTTAGCTCAGTGGCCAGAGCGCCCGACTGTAGATCGGGCGGTCCCCGGTTCAAAT
CCGGGAGGCGGGACtt
Downstream region at tRNA end position 
cttacctctt
Secondary structure (Cloverleaf model)
>A178000373	Tyr	GTA
                   c      ACtt cttacctctt
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     G G G C C     A
      T G A        A      | | | | |     A
    G       C T C G       C C C G G     C
    G       | | | |                 T T
    C       G A G C
      C A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       G *
                    G T A
intron: position=38, length=23 (in A-loop)
TTTGCCCCTGCTGGTGAGCAGGT
Intron
Comment/Decision
Genome/Seq. Info.-

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