The detailed information of tRNA gene sequence


Sequence ID>A178000375
Genome IDCP005934
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanomassiliicoccus intestinalis Issoire-Mx1 [CP005934]
Start position on genome 552349
End posion on genome 552462
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ggaaccaact
tRNA gene sequence 
CCCGACTTAGCTCAGTCTGGCTAGAGCGGCTGACTGTAGATCAGCAGGTCCCCGGTTCAA
ATCCGGGAGTCGGGACCA
Downstream region at tRNA end position 
tttttcataa
Secondary structure (Cloverleaf model)
>A178000375	Tyr	GTA
                   t      ACCA tttttcataa
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     T - A          T A
                    T     G G G C C     A
    C T G A        A      | | | | |     A
  T         C T C G       C C C G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G *
                    G T A
intron: position=38, length=36 (in A-loop)
TGGGTTCCCGGTACTTCCGGTTCCTCAGCCGCTGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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