The detailed information of tRNA gene sequence


Sequence ID>A178000382
Genome IDCP006646
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum adornatum 1910b [CP006646]
Start position on genome 418606
End posion on genome 418712
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tcggctcttt
tRNA gene sequence 
GGGCCCGTCGTCTAGCGGTTAGGATGTCGCCCTCACACGGCGGAGGTCCCGGGTTCGAAT
CCCGGCGGGCCCACCA
Downstream region at tRNA end position 
ttgccgcgtg
Secondary structure (Cloverleaf model)
>A178000382	Val	CAC
                   t      ACCA ttgccgcgtg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       C C G G G     C
    G       + | | +                 T T
    T       G G A T
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A *
                    C A C
intron: position=38, length=31 (in A-loop)
AGGCGCCGTGTTTGGGGCTCGACTCTGGGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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