The detailed information of tRNA gene sequence


Sequence ID>A178000385
Genome IDCP006646
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum adornatum 1910b [CP006646]
Start position on genome 579024
End posion on genome 579122
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
acctcgggtc
tRNA gene sequence 
GCCGGGGTAGCTCAGCCTGGGAGAGCATCCGGCTGAAGACCGGAGGGTCCCGGGTTCAAG
TCCCGGCCCCGGCACCA
Downstream region at tRNA end position 
ttcttgtaaa
Secondary structure (Cloverleaf model)
>A178000385	Phe	GAA
                   c      ACCA ttcttgtaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        A     GGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G A A
intron: position=38, length=22 (in A-loop)
AACCTCGCAAGCGTGCGTAGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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