The detailed information of tRNA gene sequence


Sequence ID>A178000390
Genome IDCP006646
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum adornatum 1910b [CP006646]
Start position on genome 1025455
End posion on genome 1025360
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ctgaagtcga
tRNA gene sequence 
GCCCCGGTAGCTCAGCTCGGTAGAGCGCCGCTCTGGTAAGGCGGAGGTCCCGGGTTCAAA
CCCCGGCCGGGGCTCCA
Downstream region at tRNA end position 
tttttttcct
Secondary structure (Cloverleaf model)
>A178000390	Thr	GGT
                   a      TCCA tttttttcct
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          C A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    C       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    T + G
                  C       A
                  T       A *
                    G G T
intron: position=38, length=19 (in A-loop)
AGAACTAGTCCTTCCGGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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