The detailed information of tRNA gene sequence


Sequence ID>A178000391
Genome IDCP006867
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnicoccus islandicus DSM 13165 [CP006867]
Start position on genome 150264
End posion on genome 150164
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ccctcagctg
tRNA gene sequence 
GCCGCCGTAGCTCAGCTGGTTAGAGCGCGGGACTGTGGATCCCGAGGTCCCGGGTTCAAA
TCCCGGCGGCGGCCCCA
Downstream region at tRNA end position 
ccacgtttac
Secondary structure (Cloverleaf model)
>A178000391	His	GTG
                   g      CCCA ccacgtttac
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    G T G
intron: position=38, length=24 (in A-loop)
AGGCCCGGCTGAGAGGCCGCGGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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