The detailed information of tRNA gene sequence


Sequence ID>A178000418
Genome IDCP007060
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalobacterium sp. DL1 [CP007060]
Start position on genome 1033151
End posion on genome 1033253
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
taaaacgaga
tRNA gene sequence 
AGTCCCGTGGTGTAGCTGGCCAATCATCTGGGCCTTTGGAGCCCAGGACGGCGGTTCGAA
TCCGCCCGGGACTAtag
Downstream region at tRNA end position 
tcaaaacggc
Secondary structure (Cloverleaf model)
>A178000418	Gln	TTG
                   a      Atag tcaaaacggc
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C G C C     A
    T C G A        G      | | | | |     G
  G         T G T G       G G C G G     C
  G           | | +                 T T
  C         T C A T
    C A A          C     GGAC
                    T - A
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    T T G
intron: position=38, length=29 (in A-loop)
ACCGGTGCGGGTTCGCGCGCCGGGAAGTC
Intron
Comment/Decision
Genome/Seq. Info.-

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