The detailed information of tRNA gene sequence


Sequence ID>A178000484
Genome IDCP009515
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina lacustris Z-7289 [CP009515]
Start position on genome 1412053
End posion on genome 1411959
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
cctgcaccat
tRNA gene sequence 
GGGCTCGTAGGGTAGCCAGGATATCCTAATGGGCTTCGAACCCATTGACTCGTGTTCGAA
TCGCGGCGGGCCCGCta
Downstream region at tRNA end position 
actaatcttt
Secondary structure (Cloverleaf model)
>A178000484	Arg	TCG
                   t      GCta actaatcttt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G G C G C     A
    C C G A        A      + | | + |     G
  A         T G G G       T C G T G     C
  G           | | +                 T T
  G         T C C T
    A T A          A     TGAC
                    A - T
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A *
                    T C G
intron: position=38, length=20 (in A-loop)
AGTAAGATTCTTACGAAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK