The detailed information of tRNA gene sequence


Sequence ID>A178000512
Genome IDCP009961
Search identical group
Phylum/ClassThermoproteota
SpeciesInfirmifilum uzonense 1807-2 [CP009961]
Start position on genome 1202111
End posion on genome 1202020
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
atttctcaag
tRNA gene sequence 
GGGCCCGTGGCGTAGCATGGAAGCGTGGCGGCCTGCGGAGCCGTAGGTCCCGGGTTCGAG
TCCCGGCGGGCCCGtga
Downstream region at tRNA end position 
gtttgttctc
Secondary structure (Cloverleaf model)
>A178000512	Arg	GCG
                   g      Gtga gtttgttctc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     G G C C C     A
      C G A        G      | | | | |     G
    A       T G C G       C C G G G     C
    T       + | | +                 T T
    G       G C G T
      G A A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    G C G
intron: position=38, length=18 (in A-loop)
AGCATACGGCTCGTAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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