The detailed information of tRNA gene sequence


Sequence ID>A178000514
Genome IDCP009961
Search identical group
Phylum/ClassThermoproteota
SpeciesInfirmifilum uzonense 1807-2 [CP009961]
Start position on genome 1463920
End posion on genome 1463817
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gttaacaggg
tRNA gene sequence 
GCCCGGATGGTGTAGCCTGGATAACACGCTGGCCTGTGGAGCCAGTGAACCCGGGTTCAA
ATCCCGGTCCGGGCCCtc
Downstream region at tRNA end position 
ccaggtttac
Secondary structure (Cloverleaf model)
>A178000514	His	GTG
                   g      CCtc ccaggtttac
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T A
                    T     G G C C C     A
    C C G A        G      | | | | |     A
  T         T G T G       C C G G G     C
  G         | | | |                 T T
  G         A C A C
    A T A          G     TGAAC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    G T G
intron: position=38, length=28 (in A-loop)
AGCGCGAACCCACAGGCAGCGCGCAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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