The detailed information of tRNA gene sequence


Sequence ID>A178000518
Genome IDCP010514
Search identical group
Phylum/ClassNanoarchaeota
SpeciesCandidatus Nanopusillus acidilobi 7A [CP010514]
Start position on genome 264079
End posion on genome 263979
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatttattaa
tRNA gene sequence 
GCCGCCGTAGCTCAGGGGTTGGAGCGCCTGGCTCATAACCAGGAGGTCCGGGGTTCAAAT
CCCCGCGGCGGCAttg
Downstream region at tRNA end position 
gtttacttta
Secondary structure (Cloverleaf model)
>A178000518	Met	CAT
                   a      Attg gtttacttta
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
      G G A        A      | | | | |     A
    G       C T C G       C G G G G     C
    G       | | | |                 T T
    T       G A G C
      T G          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A *
                    C A T
intron: position=38, length=28 (in A-loop)
ACCTATAAAATCGATGAGTTTGTGAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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