The detailed information of tRNA gene sequence


Sequence ID>A178000543
Genome IDCP011056
Search identical group
Phylum/ClassThermoproteota
SpeciesSaccharolobus solfataricus SARC-C [CP011056]
Start position on genome 1801219
End posion on genome 1801323
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tttaaaatgT
tRNA gene sequence 
GCGGGGGTGCCCGAGCTGGTCAAAGGGGGCGGACTCAAGATCCGCTGGCGAAGGCCTTCG
CGGGTTCAAATCCCGTCCCCCGCATCC
Downstream region at tRNA end position 
Atttcttcaa
Secondary structure (Cloverleaf model)
>A178000543	Leu	CAA
                   T      ATCC Atttcttcaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
    T C G A        G      + | | | |     A
  G         G C C C       G C G G G     C
  G           | | |                 T T
  T         A G G G
    C A A          G     TGGCGAAGGCCTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    C A A
intron: position=38, length=16 (in A-loop)
ACCCCTTAAGTGAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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