The detailed information of tRNA gene sequence


Sequence ID>A178000598
Genome IDCP012173
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula ARS50-2 [CP012173]
Start position on genome 2152535
End posion on genome 2152624
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tgattcatgt
tRNA gene sequence 
CCCACCGTAGCTCAGCCCGGTTCAGAGCGCCCGGCTGTAGACCGGGTGGTCCGGGGTTCA
AGTCCCCGCGGTGGGACtc
Downstream region at tRNA end position 
tttaggtcat
Secondary structure (Cloverleaf model)
>A178000598	Tyr	GTA
                   t      ACtc tttaggtcat
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C          T G
                    T     G C C C C     A
    C C G A        A      | | | | |     A
  C         C T C G       C G G G G     C
  G         | | | |                 T T
  G         G A G C
    T T C A        G     TGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G T A
intron: position=38, length=13 (in A-loop)
ATAAAGGGCAGTT
Intron
Comment/Decision
Genome/Seq. Info.-

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