The detailed information of tRNA gene sequence


Sequence ID>A178000602
Genome IDCP012174
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula ARS120-1 [CP012174]
Start position on genome 58879
End posion on genome 58782
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gtttatttct
tRNA gene sequence 
GCGGGGGTGCCCGAGCCTGGTCAAAGGGGGCGGACTTAAGATCCGCTGGAGCAGTCCTGC
GCGGGTCCAAATCCCGCCCCCCGCACtt
Downstream region at tRNA end position 
catcttggat
Secondary structure (Cloverleaf model)
>A178000602	Leu	TAA
                   t      ACtt catcttggat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        G      | | | | |     A
  T         G C C C       G C G G G     C
  G           | | |                 T C
  G         A G G G
    T C A A        G     TGGAGCAGTCCTGC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    T A A
intron: position=38, length=12 (in A-loop)
ATCACATAGGTG
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK