The detailed information of tRNA gene sequence


Sequence ID>A178000662
Genome IDCP012986
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNanohaloarchaea archaeon SG9 [CP012986]
Start position on genome 1086445
End posion on genome 1086584
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
acatacacaa
tRNA gene sequence 
GCCCAACTAGCTCAGTAGGTAGAGCGCCACGCTGTTAACGTGGTGGTCCCAGGTTCGAAT
CCTGGGTTGGGCGCtg
Downstream region at tRNA end position 
aaggtttctt
Secondary structure (Cloverleaf model)
>A178000662	Asn	GTT
                   a      GCtg aaggtttctt
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T
                     C - G          T A
                    T     G G T C C     A
      T G A        A      | | | | |     G
    A       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     TGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  C       A
                  T       A *
                    G T T
intron: position=38, length=66 (in A-loop)
AACTCGTCCTTTCTCAAGACGAGAAAGGGCGTACAGAAGGCCTTTCAAAGGCCTTCATATACAGTT
Intron
Comment/Decision
Genome/Seq. Info.-

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