The detailed information of tRNA gene sequence


Sequence ID>A178000664
Genome IDCP013011
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrodictium delaneyi Su06 [CP013011]
Start position on genome 1168645
End posion on genome 1168524
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
atacatggga
tRNA gene sequence 
GCCGCCGTAGCTCAGCGGTAGAGCACCGGCCTCGTAAGCCGGGGGTCCCGGGTTCGAATC
CCGGCGGCGGCTCCA
Downstream region at tRNA end position 
ctgcgggcct
Secondary structure (Cloverleaf model)
>A178000664	Thr	CGT
                   a      TCCA ctgcgggcct
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
        G A        A      | | | | |     G
      C     C T C G       C C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    C G T
intron: position=38, length=47 (in A-loop)
AGCCCCCGCTGGCGTCCACTGGCGGGATGAGCCGCGGGTTCCGAGGG
Intron
Comment/Decision
Genome/Seq. Info.-

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