The detailed information of tRNA gene sequence


Sequence ID>A178000677
Genome IDCP017006
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus sp. A20 [CP017006]
Start position on genome 312178
End posion on genome 312078
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gatttttatt
tRNA gene sequence 
GCGGGGGTGCCCGAGCTGGTCAAAGGGGGCGGACTCAAGATCCGCTGGCGAAGGCCTACG
CGGGTTCAAATCCCGTCCCCCGCACCt
Downstream region at tRNA end position 
ttatgaacat
Secondary structure (Cloverleaf model)
>A178000677	Leu	CAA
                   t      ACCt ttatgaacat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
    T C G A        G      + | | | |     A
  G         G C C C       G C G G G     C
  G           | | |                 T T
  T         A G G G
    C A A          G     TGGCGAAGGCCTAC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    C A A
intron: position=38, length=15 (in A-loop)
ACCCTTATGTAAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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