The detailed information of tRNA gene sequence


Sequence ID>A178000681
Genome IDCP017006
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus sp. A20 [CP017006]
Start position on genome 444991
End posion on genome 444882
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tgcaaatatt
tRNA gene sequence 
GCGGGGGTGCCCGAGCCTGGTCAAAGGGGGCGGACTTAAGATCCGCTGGCGAAGGCCTGC
ACGGGTTCAAATCCCGTCCCCCGCACtt
Downstream region at tRNA end position 
aattatagac
Secondary structure (Cloverleaf model)
>A178000681	Leu	TAA
                   t      ACtt aattatagac
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
    C C G A        G      | | | | |     A
  T         G C C C       A C G G G     C
  G           | | |                 T T
  G         A G G G
    T C A A        G     TGGCGAAGGCCTGC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    T A A
intron: position=38, length=24 (in A-loop)
ATCTAGGCCCCATAAAAATAAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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