The detailed information of tRNA gene sequence


Sequence ID>A178000691
Genome IDCP017922
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosocosmicus hydrocola G61 [CP017922]
Start position on genome 2123315
End posion on genome 2123415
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatatcaaaa
tRNA gene sequence 
GCCGGGGTCGCCTAGCCTGGAAGGGCGCAAGCCTGGAAAGCTTGTGGCCCGTGAGGGCCT
CGAGGGTTCAAATCCCTCTCCCGGCGCta
Downstream region at tRNA end position 
tagatgtggg
Secondary structure (Cloverleaf model)
>A178000691	Ser	GGA
                   a      GCta tagatgtggg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      | | | | |     A
    C       T C C G       G A G G G     C
    T       + | | |                 T T
    G       G G G C
      G A A        G     TGGCCCGTGAGGGCCTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A *
                    G G A
intron: position=38, length=14 (in A-loop)
ATTTAGTACTACAT
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK