The detailed information of tRNA gene sequence


Sequence ID>A178000693
Genome IDCP019067
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorientalis sp. IM1011 [CP019067]
Start position on genome 1393207
End posion on genome 1393312
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ctgcgaacgt
tRNA gene sequence 
GCCGCCGTAGCTCAGCTGGTAGAGCACCTCGCTGTTAACGAGGTTGTCCCAGGTTCGAAC
CCTGGCGGTGGCGCtt
Downstream region at tRNA end position 
ctcccaatct
Secondary structure (Cloverleaf model)
>A178000693	Asn	GTT
                   t      GCtt ctcccaatct
                     G - C
                     C - G
                     C - G
                     G + T
                     C - G
                     C - G
                     G - C          C A
                    T     G G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TTGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A *
                    G T T
intron: position=38, length=32 (in A-loop)
CGGTGAGGAGGTCTCGCCTGTTCACCGCAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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