The detailed information of tRNA gene sequence


Sequence ID>A178000720
Genome IDFN869859
Search identical group
Phylum/ClassThermoproteota
SpeciesThermoproteus tenax Kra 1 [FN869859]
Start position on genome 1497453
End posion on genome 1497351
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aggttatcga
tRNA gene sequence 
GCGGGGGTGCCCGAGCCAGGTCAAAGGGGCAGGGTTGTCGTCCCTGTGGCGTAGGCCTGC
GTGGGTTCAAATCCCACCCCCCGCAttc
Downstream region at tRNA end position 
tgtctcctgt
Secondary structure (Cloverleaf model)
>A178000720	Asp	GTC
                   a      Attc tgtctcctgt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C C G A        G      | | | | |     A
  A         G C C C       G T G G G     C
  G           | | |                 T T
  G         A G G G
    T C A A        G     TGGCGTAGGCCTGC
                    C - G
                    A - T
                    G - C
                    G - C
                    G - C
                  T       T
                  T       G *
                    G T C
intron: position=38, length=18 (in A-loop)
GCTCAGCCGGCCCAGAGG
Intron
Comment/Decision
Genome/Seq. Info.-

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