The detailed information of tRNA gene sequence


Sequence ID>A178000752
Genome IDLT607756
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium congolense [LT607756]
Start position on genome 181839
End posion on genome 181729
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tataagccac
tRNA gene sequence 
GCCGGGGTGGCTCAGTTGGTTAGAGCGCACGGCTCATAACCGTGAGGCCGCGGGTTCGAA
TCCCGCCCCCGGCACtt
Downstream region at tRNA end position 
caaacaattt
Secondary structure (Cloverleaf model)
>A178000752	Met	CAT
                   c      ACtt caaacaattt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    C A T
intron: position=38, length=36 (in A-loop)
GGGTATTAAGCAAGTGCTCTGACTTTTTCCTGGGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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