The detailed information of tRNA gene sequence


Sequence ID>A178000755
Genome IDLT719092
Search identical group
Phylum/ClassUnclassified
SpeciesCuniculiplasma divulgatum PM4 [LT719092]
Start position on genome 1357590
End posion on genome 1357678
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tattttaagc
tRNA gene sequence 
GCCGGGGTGGCTTAGTAGGTGGAGCGCCGGACTCATAATCCGGAGGTCTCGGGTTCGATC
CCCGATCCCGGCAtac
Downstream region at tRNA end position 
atttaaatgt
Secondary structure (Cloverleaf model)
>A178000755	Met	CAT
                   c      Atac atttaaatgt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          C T
                    T     A G C C C     A
      T G A        G      | | | | |     G
    A       T T C G       T C G G G     C
    G       + | | |                 T T
    G       G A G C
      T G          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    C A T
intron: position=38, length=16 (in A-loop)
AGAATTTTTCTGAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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