The detailed information of tRNA gene sequence


Sequence ID>A173000016
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 1350032
End posion on genome 1350102
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
attaatacgt
tRNA gene sequence 
GCCCGGGTGGCAGAGAGGCTATGCGTCTGACCGCAGATCGGAGAAGGTGAGTTCAATTCT
CATCCCGGGCTttc
Downstream region at tRNA end position 
tttcacttta
Secondary structure (Cloverleaf model)
>A173000016	Cys	GCA
                   t      Tttc tttcacttta
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T T
                    T     T A C T C     A
        G A        G      + | | | |     A
      A     G A C G       G T G A G     C
      G       | | |                 T T
      G     A T G C
        C T        G     GAAG
                    T - A
                    C - G
                    T + G
                    G - C
                    A - T
                  C       A
                  C       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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