The detailed information of tRNA gene sequence


Sequence ID>A173000039
Genome IDCP001939
Search identical group
Phylum/ClassThermoproteota
SpeciesThermosphaera aggregans DSM 11486 [CP001939]
Start position on genome 104270
End posion on genome 104346
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
aacagtagaa
tRNA gene sequence 
GCGGCGGTCGTCTAGCCTGGACTAGGACGCCGGCCCCCCAAGCCGGAGATCCCGGGTTCA
AATCCCGGCCGCCGCACtt
Downstream region at tRNA end position 
tcttcataag
Secondary structure (Cloverleaf model)
>A173000039	Gly	CCC
                   a      ACtt tcttcataag
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    A C T A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  C       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.-

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