The detailed information of tRNA gene sequence


Sequence ID>A173000042
Genome IDCP002009
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus infernus ME [CP002009]
Start position on genome 487257
End posion on genome 487345
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atttttacgt
tRNA gene sequence 
GGCGCGGGGTACCGGGCTTGGTAGCCCGGGGCGGACTTCAGATCCGTCGAGGGCGATGGC
CCTCGGGGTTCGATTCCCCCCCCGCGCCGttt
Downstream region at tRNA end position 
tttagcttaa
Secondary structure (Cloverleaf model)
>A173000042	SeC	TCA
                   t      Gttt tttagcttaa
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T T
                    G     C C C C C     A
    T C G G        T        | | | |     G
  T         G C C A       C G G G G     C
  G         |   |                   T T
  G         C C G G
    T A G C        G     CGAGGGCGATGGCCCT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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