The detailed information of tRNA gene sequence


Sequence ID>A173000043
Genome IDCP002009
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus infernus ME [CP002009]
Start position on genome 1155768
End posion on genome 1155681
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
caattagaga
tRNA gene sequence 
GCAGGGGTCGCCAAGCCTGGCCAAAGGCGCCGGGCCTAGGACCCGGTCCCGTAGGGGTTC
GGGGGTTCAAATCCCCTCCCCTGCACCA
Downstream region at tRNA end position 
ttgttgtggc
Secondary structure (Cloverleaf model)
>A173000043	Leu	TAG
                   a      ACCA ttgttgtggc
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C C C C     A
    C C G A        C      + | | | |     A
  T         A C C G       G G G G G     C
  G           | | |                 T T
  G         A G G C
    C C A A        G     TCCCGTAGGGGTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  C       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.-

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