The detailed information of tRNA gene sequence


Sequence ID>A173000078
Genome IDCP002737
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanotorris igneus Kol 5 [CP002737]
Start position on genome 979209
End posion on genome 979299
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aagttatagt
tRNA gene sequence 
GGCGCAGGGTACTGGGCTTGGTAGCCCAGGGCGGACTTCAGATCCGTCGAGTTCCGTTGG
GAACTCGGGGTTCGATTCCCCCCCTGCGCCGttt
Downstream region at tRNA end position 
ttaatctaaa
Secondary structure (Cloverleaf model)
>A173000078	SeC	TCA
                   t      Gttt ttaatctaaa
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C          T T
                    G     C C C C C     A
    T C G G        T        | | | |     G
  T         G T C A       C G G G G     C
  G         |                       T T
  G         C C A G
    T A G C        G     CGAGTTCCGTTGGGAACT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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