The detailed information of tRNA gene sequence


Sequence ID>A173000120
Genome IDCP003843
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus sediminis AR2 [CP003843]
Start position on genome 519351
End posion on genome 519427
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tggatttgtt
tRNA gene sequence 
GGGATTGTGGTCTAGCTTGGTATGATTCTGCGTTTGGGACGCAGAGGTCGGGAATTCAAA
TTTCCCCAATCCCACCA
Downstream region at tRNA end position 
tcatcatctt
Secondary structure (Cloverleaf model)
>A173000120	Pro	TGG
                   t      ACCA tcatcatctt
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     T - A
                     G - C          T A
                    T     C C C T T     A
      C G A        G      | | | | |     A
    T       T C T G       G G G A A     C
    T         | | +                 T T
    G       T G A T
      G T A        T     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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