The detailed information of tRNA gene sequence


Sequence ID>A173000121
Genome IDCP003843
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus sediminis AR2 [CP003843]
Start position on genome 608480
End posion on genome 608563
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cagaatagtT
tRNA gene sequence 
GCCGAGATAGCCAAGTAGTACGGCGGCCGTCTCGAAAACGGCTACGCGCAAGCGTGCGGG
GGTTCGAATCCCTCTCTCGGCGTtc
Downstream region at tRNA end position 
ttaacatagc
Secondary structure (Cloverleaf model)
>A173000121	Ser	CGA
                   T      GTtc ttaacatagc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
        G A        A      | + | | |     G
      T     A C C G       G G G G G     C
      A       | | |                 T T
      G     C G G C
        T A        G     TACGCGCAAGCGTGC
                    G - C
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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