The detailed information of tRNA gene sequence


Sequence ID>A173000167
Genome IDCP006965
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus paralvinellae ES1 [CP006965]
Start position on genome 1278361
End posion on genome 1278284
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
cttgtgctga
tRNA gene sequence 
GGGCCCGTAGCTTAGTCTGGATAGAGCGCCGGCCCCCGGAGCCGGAGGTCGCGGGTTCAA
ATCCCGCCGGGCCCGCCA
Downstream region at tRNA end position 
acaaactttc
Secondary structure (Cloverleaf model)
>A173000167	Arg	CCG
                   a      GCCA acaaactttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
    C T G A        A      | | | | |     A
  T         T T C G       G C G G G     C
  G         + | | |                 T T
  G         G A G C
    A T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  C       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.-

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