The detailed information of tRNA gene sequence


Sequence ID>A173000219
Genome IDCP009514
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina mazei C16 [CP009514]
Start position on genome 1217368
End posion on genome 1217297
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tatacaggct
tRNA gene sequence 
GCCAAGGTGGCGGAGCGGTCACGCAATCGCCAGCAGAGCGATTCAGTCCTGGTTCAAATC
CGGACCTTGGCTtct
Downstream region at tRNA end position 
ttaaattttt
Secondary structure (Cloverleaf model)
>A173000219	Cys	GCA
                   t      Ttct ttaaattttt
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     A G G C C     A
        G A        G        | + | |     A
      C     G G C G       C C T G G     C
      G       | | |                 T T
      G     A C G C
        T C        A     TCAGT
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  A       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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