The detailed information of tRNA gene sequence


Sequence ID>A173000229
Genome IDCP009526
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina barkeri str. Wiesmoor [CP009526]
Start position on genome 4210804
End posion on genome 4210881
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cctgctctgc
tRNA gene sequence 
GGGGCCGTAGGGTAGCCTGGTCCATCCTGCAAGGCTGGGGGTCTTGCGACCTGAGTCCAA
ATCTCAGCGGCCCCACCA
Downstream region at tRNA end position 
aacttttact
Secondary structure (Cloverleaf model)
>A173000229	Pro	GGG
                   c      ACCA aacttttact
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G A C T C     A
    C C G A        A      | | | | |     A
  T         T G G G       C T G A G     C
  G           | | +                 T C
  G         T C C T
    T C C A        G     CGAC
                    C - G
                    A - T
                    A - T
                    G - C
                    G + T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.-

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