The detailed information of tRNA gene sequence


Sequence ID>A173000338
Genome IDCP020477
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidianus manzaensis YN-25 [CP020477]
Start position on genome 1479984
End posion on genome 1479899
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attaaatatT
tRNA gene sequence 
GCCAGGGTGCCCGAGCGGACTAAGGGGCTGGCCTTGAGAGCCAGTAGGGGAATCCCTGCG
CGGGTCCGAATCCCGTCCCTGGCGTtg
Downstream region at tRNA end position 
aaggagaaac
Secondary structure (Cloverleaf model)
>A173000338	Ser	TGA
                   T      GTtg aaggagaaac
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        G      + | | | |     G
    G       G C C C       G C G G G     C
    G         | | |                 T C
    A       A G G G
      C T A        G     TAGGGGAATCCCTGC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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